Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921710.1_cds_XP_016470615.1_63045
CDS Infomation

[gene=LOC107792880] [db_xref=GeneID:107792880] [protein=uncharacterized protein LOC107792880] [protein_id=XP_016470615.1] [location=complement(join(59092..59362,65343..66161,66706..66821,67015..67845))] [gbkey=CDS]
Sequence

ATGGCATCTTCTCAAGTAGAAATTGCCTCCTCTTCTCCATTGGGTTATGTCCTTAATAGA
TGTATTGCTAGAGATTCAAATTCTTTTCAAGAAAATTTCAAGAATTTGGTCCAAAACCAT
GCAGATTTATGGGTACACAAAACAAAATGTGACAAGAATGAGAATAATAGTCCAAAGAAG
AGAAGTAAAGCTGCTGAAAAATGGGATAAAGCTAGAAATATGGTATTTTCAATGGACAAA
GAGAAGAATAAAGAAAGTTGTGTTGATGTTCCAAATCTTGGTGGTGTTTCTTCCCTTGTG
AGAAAATGGAAAATTTTTGAAGCTGAGTCAAAAACCATGAATTTGGCCAACAATTCTGAG
AATTCTTTATATGTAGAATCCCCACATAAAAGATTTGATGAATGTGATGAATCTTGCATT
GTGAAAAGTGATTCATTTGGTGGCTGGGAATCCGATAAAACGGATAACATTGATTTAAAT
TCTGTTCAGGGTACTAAAGATTCTGATATTACAGAAAGTGAGAGGCTGAGAGTTTCAGAT
ATTATCAAGAAATTGACATATAGTAATGGCGATGAAGGTCAGCCACGCGACTATAATGGT
AATGTTGTTGTAAATGGTGGATCGTTGCCTCGAGTTAGGACAACATTGGATGGTTCAGAA
CAACAACAAAGATGTTATTTTTCACCTGTTGTGAATTCACCTCGTTTCATCAGAGGGAGA
CAGGCGTTTAGTGATTTGCTCTTGCAAATGGAGCGCGATAGACATAGGGAGATTCAAAGT
CTTGTGGAACGTAAAGCAGTTTCCAAGTTCCAACAAAGAGGCCGCATTCAGGCTTTGCTT
CGAGTTAGACTAATACGACGTGGTGCAGAAGTCAGAGATGGCCGATCAATGAATTGCTCA
GCGTCTGAATCAAATAGATTGACACATTCTGCAATTATGCATCTCAGGGAAAAGTTCAAT
ACAGTAGGACAACATCGTCTTGCTGACTCAAGAAACAACTCAAGGGAAGTGGTAGAAAGT
GCTCGTGAAGTTGGAAGCCTCCCGTCTACACCAAAACATCGAAGGGAACTGGCTCGTAGC
AACTCTGCAAAAGCAGGAACTGGATTTTCAACACATCAACATAGAGAAGAGGATCCGCCT
AAGGAACTGGTCAAGGAGAGTTCAGGACTGCAGCCCGGTGTAGCTAACTCAAGAAGTGTC
CCTATAACATTAGGAGATACAACTAAAGAGGTGGTAGATAACATCCTAAAAGTTGGAAAT
TTTTGTACATCCAATCAACCACGCGAAGAGAACCATCACAAGGAATTATCCAAGCAAACA
AGCCCCAAAAAGATGGCAGTATTTTCTTGTAGATCGAATCAACATGATATGGACCTTAAC
AGTCGAGAAGTTAGCATCAGCTTACCGAGCTATACTTCACAAGCACAAAGCACAGACAAT
TTCCATGAACTGCAAATAAAGCAGAATCTAGGAACTAGTAATGAGTGGTCTAGTGATGGC
GCTAATCCTCAGAGCGATTGGGAAGAGGAAACCGCGAGCCAACACCTAGTTGAATGTGAT
AGTGGTTGGGTAAGTGATTATTCCCACACAGCTAGTGGATGGGATGAAATACAGTCTGCT
TACCAGCAACAAGTAGAAGGTAATGAAGACTGGATAAGCAATGTCTCTCGTCCACGTAAA
GAATGGGAAGGCCTCAGGCACGAAAGATACCAAGAGATGCTTGATCGATTCTTAGACAAC
CATGATATACAACAACTTCTTCAAAGAAAAAGTGTTTCAAATTTTCTTACCAGTGATTTG
AGGGAGAAAATTGATCGAATAATGGCGTCTCGCTCACAACAACTACCAAATGCCATGAGA
ATCAGCCATGTTGAGGAAGAAGAAGTACCAACACAAGTAGATGAAGAAGAGAAAGAGGAA
GACGACATGGTATTACGACATAATGCAAGAGAAGAGGATGTTGAGGTAGAAGAAGAACAA
GACTCGGGTTATGACGATGAAGATGAAGTATTAATTGATGACAACACATCATCATGA

Peptide Sequence

PEP ID

XP_016470615.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107792880 [Nicotiana tabacum]
Sequence

MASSQVEIASSSPLGYVLNRCIARDSNSFQENFKNLVQNHADLWVHKTKCDKNENNSPKK
RSKAAEKWDKARNMVFSMDKEKNKESCVDVPNLGGVSSLVRKWKIFEAESKTMNLANNSE
NSLYVESPHKRFDECDESCIVKSDSFGGWESDKTDNIDLNSVQGTKDSDITESERLRVSD
IIKKLTYSNGDEGQPRDYNGNVVVNGGSLPRVRTTLDGSEQQQRCYFSPVVNSPRFIRGR
QAFSDLLLQMERDRHREIQSLVERKAVSKFQQRGRIQALLRVRLIRRGAEVRDGRSMNCS
ASESNRLTHSAIMHLREKFNTVGQHRLADSRNNSREVVESAREVGSLPSTPKHRRELARS
NSAKAGTGFSTHQHREEDPPKELVKESSGLQPGVANSRSVPITLGDTTKEVVDNILKVGN
FCTSNQPREENHHKELSKQTSPKKMAVFSCRSNQHDMDLNSREVSISLPSYTSQAQSTDN
FHELQIKQNLGTSNEWSSDGANPQSDWEEETASQHLVECDSGWVSDYSHTASGWDEIQSA
YQQQVEGNEDWISNVSRPRKEWEGLRHERYQEMLDRFLDNHDIQQLLQRKSVSNFLTSDL
REKIDRIMASRSQQLPNAMRISHVEEEEVPTQVDEEEKEEDDMVLRHNAREEDVEVEEEQ
DSGYDDEDEVLIDDNTSS

Transcript Sequence

Gene sequence data has not been registered.